Research workbench

Crystal structure of N-terminal amidase with gln-val peptide

Analyse Crystal structure of N-terminal amidase with gln-val peptide in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5K60
Type: protein
Length: 431 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: NTA1P
UniProt: N1P8Q8
Pockets: 2 · best druggability 0.54

Structure

x-ray diffraction · 1 distinct chain · 26% helix, 25% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	NTA1P	protein	431	26% helix, 25% strand	N1P8Q8

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	180	0.54	0.79	27	empty
2	127	0.47	0.79	18	empty

Compared structures

5K60 · Crystal structure of N-terminal amidase with Gln-Val peptide · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt N1P8Q8
Elsewhere: RCSB PDB 5K60 · PDBe 5K60 · UniProt N1P8Q8

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.