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LP2006, a handcuff-topology lasso peptide antibiotic

Analyse LP2006, a handcuff-topology lasso peptide antibiotic in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
5JPL
Type
protein
Length
17 residues
Chains
1
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Uncharacterized protein
UniProt
J7LF03

Structure

solution nmr · 1 distinct chain · 0% helix, 53% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AUncharacterized proteinprotein170% helix, 53% strandJ7LF03

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

  • 5JPL · LP2006, a handcuff-topology lasso peptide antibiotic · the same entry in another collection · chain A against A, TM-score 1.00

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