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Sortase B from listeria monocytogenes.

Analyse Sortase B from listeria monocytogenes. in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5JCV
Type: protein
Length: 175 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: LMO2181 protein
UniProt: Q8Y588
Ligands: SO4, CL

Structure

x-ray diffraction · 1 distinct chain · 25% helix, 31% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	LMO2181 protein	protein	175	25% helix, 31% strand	Q8Y588

Ligands and binding sites

SO4 · Sulfate ion · ion · chains A
CL · Chloride ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 4 modified (engineered).

Compared structures

5JCV · Sortase B from Listeria monocytogenes. · the same entry in another collection · chain A against A, TM-score 1.00
Q8Y588 · AlphaFold monomer V2.0 prediction for sortase B (Q8Y588) · a predicted model of the same protein · chain A against A, TM-score 0.93

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8Y588
Elsewhere: RCSB PDB 5JCV · PDBe 5JCV · UniProt Q8Y588

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