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Dimerization interface of the noncrystalline HIV-1 capsid protein lattice from solid state NMR spectroscopy of tubular assemblies

Analyse Dimerization interface of the noncrystalline HIV-1 capsid protein lattice from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
5IRT
Type
protein
Length
38 residues
Chains
2
Method
solid-state nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Capsid protein P24
UniProt
P12493

Structure

solid-state nmr · 1 distinct chain · 68% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, BCapsid protein P24protein1968% helix, 0% strandP12493

Interfaces

1 interface between chains.

  • A–B · 368 Ų buried · 2 hydrogen bonds · protein-protein

Compared structures

  • 5IRT · Dimerization interface of the noncrystalline HIV-1 capsid protein lattice from solid… · the same entry in another collection · chain A against A, TM-score 1.00

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