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Crystal structure of mouse CNTN3 IG5-FN2 domains

Analyse Crystal structure of mouse CNTN3 IG5-FN2 domains in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5I99
Type: protein
Length: 398 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Contactin-3
UniProt: Q07409
Pockets: 2 · best druggability 0.32

Structure

x-ray diffraction · 1 distinct chain · 3% helix, 48% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Contactin-3	protein	398	3% helix, 48% strand	Q07409

Ligands and binding sites

GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	71	0.32	0.75	17	empty
2	54	0.32	0.76	13	empty

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

5I99 · Crystal structure of mouse CNTN3 Ig5-Fn2 domains · the same entry in another collection · chain A against A, TM-score 1.00
Q07409 · AlphaFold monomer V2.0 prediction for contactin-3 (Q07409) · a predicted model of the same protein · chain A against A, TM-score 0.58

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q07409
Elsewhere: RCSB PDB 5I99 · PDBe 5I99 · UniProt Q07409

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