Research workbench
Crystal structure of dmd from phage RB69
Analyse Crystal structure of dmd from phage RB69 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5I8J
- Type
- protein
- Length
- 126 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Dmd discriminator of mRNA degradation
- UniProt
- Q7Y599
Structure
x-ray diffraction · 2 distinct chains · 23% helix, 51% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Dmd discriminator of mRNA degradation | protein | 64 | 23% helix, 48% strand | Q7Y599 |
| B | Dmd discriminator of mRNA degradation | protein | 62 | 23% helix, 53% strand | Q7Y599 |
Interfaces
1 interface between chains.
- A–B · 525 Ų buried · 5 hydrogen bonds · protein-protein
Compared structures
- 5I8J · Crystal structure of Dmd from phage RB69 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7Y599
- Elsewhere: RCSB PDB 5I8J · PDBe 5I8J · UniProt Q7Y599
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