Research workbench
Crystal structure of the legionella pneumophila effector protein ravz - P6322
Analyse Crystal structure of the legionella pneumophila effector protein ravz - P6322 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5HZY
- Type
- protein
- Length
- 380 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized protein ravz
- UniProt
- Q5ZUV9
- Pockets
- 5 · best druggability 0.48
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized protein ravz | protein | 380 | 42% helix, 19% strand | Q5ZUV9 |
Pockets
5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 146 | 0.48 | 0.78 | 21 | empty |
| 2 | 99 | 0.37 | 0.75 | 19 | empty |
| 3 | 84 | 0.37 | 0.76 | 19 | empty |
| 4 | 58 | 0.30 | 0.75 | 14 | empty |
| 5 | 64 | 0.27 | 0.73 | 16 | empty |
Compared structures
- 5HZY · Crystal structure of the legionella pneumophila effector protein RavZ - P6322 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5ZUV9
- Elsewhere: RCSB PDB 5HZY · PDBe 5HZY · UniProt Q5ZUV9
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