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Sugar kinases from synechococcus elongatus PCC7942-D221A

Analyse Sugar kinases from synechococcus elongatus PCC7942-D221A in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5HTY
Type: protein
Length: 420 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Probable sugar kinase
UniProt: Q31KC7
Pockets: 5 · best druggability 0.63

Structure

x-ray diffraction · 1 distinct chain · 31% helix, 22% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Probable sugar kinase	protein	420	31% helix, 22% strand	Q31KC7

Pockets

5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	425	0.63	0.78	49	empty
2	105	0.43	0.78	20	empty
3	82	0.42	0.79	16	empty
4	58	0.32	0.77	14	empty
5	58	0.29	0.75	16	empty

Compared structures

5HTY · Sugar kinases from Synechococcus elongatus PCC7942-D221A · the same entry in another collection · chain A against A, TM-score 1.00
Q31KC7 · AlphaFold monomer V2.0 prediction for D-ribulose kinase (Q31KC7) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q31KC7
Elsewhere: RCSB PDB 5HTY · PDBe 5HTY · UniProt Q31KC7

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