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Computationally designed cyclic tetramer ANK1C4_7

Analyse Computationally designed cyclic tetramer ANK1C4_7 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
5HS0
Type
protein
Length
318 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Ankyrin domain protein ANK1C4_7
Ligands
SO4

Structure

x-ray diffraction · 2 distinct chains · 53% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AAnkyrin domain protein ANK1C4_7protein16054% helix, 0% strand—
BAnkyrin domain protein ANK1C4_7protein15853% helix, 0% strand—

Ligands and binding sites

  • SO4 · Sulfate ion · ion · 6 copies · chains A, B
  • GOL · Glycerol · additive · 3 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–B · 511 Ų buried · 2 hydrogen bonds · protein-protein

Compared structures

  • 5HS0 · Computationally Designed Cyclic Tetramer ank1C4_7 · the same entry in another collection · chain A against A, TM-score 1.00

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