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Crystal structure of equine serum albumin (esa) at pH 9.0

Analyse Crystal structure of equine serum albumin (esa) at pH 9.0 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5HOZ
Type: protein
Length: 572 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Serum albumin
UniProt: P35747
Pockets: 9 · best druggability 0.79

Structure

x-ray diffraction · 1 distinct chain · 75% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Serum albumin	protein	572	75% helix, 0% strand	P35747

Pockets

9 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	518	0.79	0.86	65	empty
2	847	0.78	0.81	68	empty
3	83	0.69	0.93	22	empty
4	249	0.59	0.79	29	empty
5	99	0.56	0.85	23	empty

Modifications

Observed in the structure: 17 disulfide (disulfide).

Compared structures

5HOZ · Crystal structure of Equine Serum Albumin (ESA) at pH 9.0 · the same entry in another collection · chain A against A, TM-score 1.00
P35747 · AlphaFold monomer V2.0 prediction for albumin (P35747) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P35747
Elsewhere: RCSB PDB 5HOZ · PDBe 5HOZ · UniProt P35747

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