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MAMB-CTD

Analyse MAMB-CTD in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5HO1
Type: protein
Length: 169 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Magnetosome protein mamb
UniProt: W6KHH6
Ligands: ZN

Structure

x-ray diffraction · 2 distinct chains · 37% helix, 38% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Magnetosome protein mamb	protein	86	36% helix, 37% strand	W6KHH6
B	Magnetosome protein mamb	protein	83	37% helix, 39% strand	W6KHH6

Ligands and binding sites

ZN · Zinc ion · metal · 3 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–B · 857 Å² buried · 16 hydrogen bonds · protein-protein

Compared structures

5HO1 · MamB-CTD · the same entry in another collection · chain A against A, TM-score 1.00
W6KHH6 · AlphaFold monomer V2.0 prediction for magnetosome protein mamb (W6KHH6) · a predicted model of the same protein · chain B against A, TM-score 0.91

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt W6KHH6
Elsewhere: RCSB PDB 5HO1 · PDBe 5HO1 · UniProt W6KHH6

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