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A GH19 chitinase domain from the cryptomeria japnonica pollen (cjp-4) allergen

Analyse A GH19 chitinase domain from the cryptomeria japnonica pollen (cjp-4) allergen in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5H7T
Type: protein
Length: 205 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Class IV chitinase
EC: 3.2.1.14
UniProt: Q5NTA4
Pockets: 1 · best druggability 0.35

Structure

x-ray diffraction · 1 distinct chain · 51% helix, 2% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Class IV chitinase (EC 3.2.1.14)	protein	205	51% helix, 2% strand	Q5NTA4

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	94	0.35	0.75	17	empty

Modifications

Observed in the structure: 3 disulfide (disulfide).

Compared structures

5H7T · A GH19 chitinase domain from the Cryptomeria japnonica pollen (CJP-4) allergen · the same entry in another collection · chain A against A, TM-score 1.00
Q5NTA4 · AlphaFold monomer V2.0 prediction for endochitinase 4 (Q5NTA4) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5NTA4
Elsewhere: RCSB PDB 5H7T · PDBe 5H7T · UniProt Q5NTA4

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