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The structure of the N-terminal of the FIBRONECTIN/FIBRINOGEN-binding protein from streptococcus suis (fbps)
Analyse The structure of the N-terminal of the FIBRONECTIN/FIBRINOGEN-binding protein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5H3X
- Type
- protein
- Length
- 267 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- FIBRONECTIN/FIBRINOGEN binding protein
- UniProt
- Q8RP86
- Pockets
- 4 · best druggability 0.43
Structure
x-ray diffraction · 1 distinct chain · 26% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | FIBRONECTIN/FIBRINOGEN binding protein | protein | 267 | 26% helix, 28% strand | Q8RP86 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 111 | 0.43 | 0.77 | 16 | empty |
| 2 | 105 | 0.34 | 0.73 | 22 | empty |
| 3 | 68 | 0.32 | 0.75 | 15 | empty |
| 4 | 53 | 0.26 | 0.73 | 18 | empty |
Compared structures
- 5H3X · The structure of the N-terminal of the fibronectin/fibrinogen-binding protein from… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8RP86
- Elsewhere: RCSB PDB 5H3X · PDBe 5H3X · UniProt Q8RP86
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