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The structure of the C-terminal of the FIBRONECTIN/FIBRINOGEN-binding protein from streptococcus suis (fbps)

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PDB: 5H3W
Type: protein
Length: 495 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: FIBRONECTIN/FIBRINOGEN binding protein
UniProt: Q8RP86
Pockets: 5 · best druggability 0.82

Structure

x-ray diffraction · 2 distinct chains · 50% helix, 14% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	FIBRONECTIN/FIBRINOGEN binding protein	protein	246	51% helix, 14% strand	Q8RP86
B	FIBRONECTIN/FIBRINOGEN binding protein	protein	249	48% helix, 14% strand	Q8RP86

Pockets

5 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	814	0.82	0.85	79	empty
2	147	0.58	0.83	25	empty
3	148	0.58	0.83	28	empty
4	60	0.52	0.87	18	empty
5	85	0.34	0.74	14	empty

Interfaces

1 interface between chains.

A–B · 1085 Å² buried · 7 hydrogen bonds · protein-protein

Compared structures

5H3W · The structure of the C-terminal of the fibronectin/fibrinogen-binding protein from… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

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Every structure of UniProt Q8RP86
Elsewhere: RCSB PDB 5H3W · PDBe 5H3W · UniProt Q8RP86

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