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Solution structure of a BCL-2 homolog from KAPOSI'S sarcoma virus

Analyse Solution structure of a BCL-2 homolog from KAPOSI'S sarcoma virus in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1K3K
Type: protein
Length: 146 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Functional anti-apoptotic factor vbcl-2 homolog
UniProt: P90504
Pockets: 2 · best druggability 0.47

Structure

solution nmr · 1 distinct chain · 63% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Functional anti-apoptotic factor vbcl-2 homolog	protein	146	63% helix, 0% strand	P90504

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	87	0.47	0.81	20	empty
2	114	0.44	0.77	21	empty

Compared structures

1K3K · Solution Structure of a Bcl-2 Homolog from Kaposi's Sarcoma Virus · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P90504
Elsewhere: RCSB PDB 1K3K · PDBe 1K3K · UniProt P90504

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