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The crystal structure of the ligand binding region of serine-glutamate repeat protein a (sgra) of enterococcus faecium

Analyse The crystal structure of the ligand binding region of serine-glutamate repeat… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5FCE
Type: protein
Length: 231 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Lpxtg family cell surface protein FMS2
UniProt: Q3Y373
Pockets: 1 · best druggability 0.35

Structure

x-ray diffraction · 2 distinct chains · 10% helix, 49% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Lpxtg family cell surface protein FMS2	protein	115	10% helix, 49% strand	Q3Y373
B	Lpxtg family cell surface protein FMS2	protein	116	9% helix, 49% strand	Q3Y373

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	73	0.35	0.76	14	empty

Interfaces

1 interface between chains.

A–B · 310 Å² buried · 2 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 6 modified (engineered).

Compared structures

5FCE · The crystal structure of the ligand binding region of Serine-glutamate repeat protein A… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q3Y373
Elsewhere: RCSB PDB 5FCE · PDBe 5FCE · UniProt Q3Y373

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