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Human T-cell immunoglobulin and mucin domain protein 4 (htim-4)

Analyse Human T-cell immunoglobulin and mucin domain protein 4 (htim-4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5F7F
Type: protein
Length: 226 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: T-cell immunoglobulin and mucin domain-containing protein 4
UniProt: Q96H15
Pockets: 1 · best druggability 0.59

Structure

x-ray diffraction · 1 distinct chain · 5% helix, 43% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	T-cell immunoglobulin and mucin domain-containing protein 4	protein	113	5% helix, 43% strand	Q96H15

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	436	0.59	0.75	46	empty

Interfaces

1 interface between chains.

A–B · 579 Å² buried · 11 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 6 disulfide (disulfide).

Compared structures

5F7F · Human T-cell immunoglobulin and mucin domain protein 4 (hTIM-4) · the same entry in another collection · chain A against A, TM-score 1.00
Q96H15 · AlphaFold monomer V2.0 prediction for T-cell immunoglobulin and mucin domain-containing… · a predicted model of the same protein · chain A against A, TM-score 0.91

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q96H15
Elsewhere: RCSB PDB 5F7F · PDBe 5F7F · UniProt Q96H15

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