Research workbench
Racemic crystal structures of pribnow box consensus promoter sequence (P21/C)
Analyse Racemic crystal structures of pribnow box consensus promoter sequence (P21/C) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5EWB
- Type
- DNA
- Length
- 48 nucleotides
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Pribnow box consensus sequence- template strand; Pribnow box consensus sequence…
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | Pribnow box consensus sequence- template strand | dna | 12 | — | — |
| B, D | Pribnow box consensus sequence- non-template strand | dna | 12 | — | — |
Interfaces
2 interfaces between chains.
- C–D · 577 Ų buried · 57 hydrogen bonds · nucleic-nucleic
- A–B · 572 Ų buried · 49 hydrogen bonds · nucleic-nucleic
Compared structures
- 5EWB · Racemic crystal structures of Pribnow box consensus promoter sequence (P21/c) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5EWB · PDBe 5EWB
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