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Crystal structure of CC1 of mouse SUN2
Analyse Crystal structure of CC1 of mouse SUN2 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5ED9
- Type
- protein
- Length
- 206 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Sun domain-containing protein 2
- UniProt
- Q8BJS4
- Pockets
- 2 · best druggability 0.67
Structure
x-ray diffraction · 3 distinct chains · 88% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sun domain-containing protein 2 | protein | 71 | 87% helix, 0% strand | Q8BJS4 |
| B | Sun domain-containing protein 2 | protein | 72 | 85% helix, 0% strand | Q8BJS4 |
| C | Sun domain-containing protein 2 | protein | 63 | 92% helix, 0% strand | Q8BJS4 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 51 | 0.67 | 0.95 | 12 | empty |
| 2 | 51 | 0.31 | 0.75 | 10 | empty |
Interfaces
3 interfaces between chains.
- A–C · 1347 Ų buried · 4 hydrogen bonds · protein-protein
- A–B · 1307 Ų buried · 6 hydrogen bonds · protein-protein
- B–C · 1131 Ų buried · 7 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8BJS4
- Elsewhere: RCSB PDB 5ED9 · PDBe 5ED9 · UniProt Q8BJS4
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