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PDZ2 of LNX2 at 277K, model with alternate conformations

Analyse PDZ2 of LNX2 at 277K, model with alternate conformations in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5E1Y
Type: protein
Length: 95 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ligand of numb protein X 2
UniProt: Q8N448
Pockets: 1 · best druggability 0.34

Structure

x-ray diffraction · 1 distinct chain · 15% helix, 37% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ligand of numb protein X 2	protein	95	15% helix, 37% strand	Q8N448

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	79	0.34	0.75	15	empty

Compared structures

5E1Y · PDZ2 of LNX2 at 277K, model with alternate conformations · the same entry in another collection · chain A against A, TM-score 1.00
Q8N448 · AlphaFold monomer V2.0 prediction for ligand of numb protein X 2 (Q8N448) · a predicted model of the same protein · chain A against A, TM-score 0.93

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8N448
Elsewhere: RCSB PDB 5E1Y · PDBe 5E1Y · UniProt Q8N448

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