Research workbench
Crystal structure of yaba amino-terminal domain from bacillus subtilis
Analyse Crystal structure of yaba amino-terminal domain from bacillus subtilis in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5DOL
- Type
- protein
- Length
- 123 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Initiation-control protein yaba
- UniProt
- P37542
Structure
x-ray diffraction · 2 distinct chains · 93% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Initiation-control protein yaba | protein | 61 | 97% helix, 0% strand | P37542 |
| B | Initiation-control protein yaba | protein | 62 | 90% helix, 0% strand | P37542 |
Interfaces
1 interface between chains.
- A–B · 977 Ų buried · 3 hydrogen bonds · protein-protein
Compared structures
- 5DOL · Crystal structure of YabA amino-terminal domain from Bacillus subtilis · the same entry in another collection · chain A against A, TM-score 1.00
- P37542 · AlphaFold monomer V2.0 prediction for initiation-control protein yaba (P37542) · a predicted model of the same protein · chain B against A, TM-score 0.91
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P37542
- Elsewhere: RCSB PDB 5DOL · PDBe 5DOL · UniProt P37542
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