Research workbench
Loop-inserted structure of P1-P1' cleaved ovalbumin mutant R339T
Analyse Loop-inserted structure of P1-P1' cleaved ovalbumin mutant R339T in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1JTI
- Type
- protein
- Length
- 762 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ovalbumin
- UniProt
- P01012
- Pockets
- 6 · best druggability 0.77
Structure
x-ray diffraction · 1 distinct chain · 28% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Ovalbumin | protein | 381 | 28% helix, 36% strand | P01012 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 995 | 0.77 | 0.79 | 94 | empty |
| 2 | 107 | 0.39 | 0.76 | 18 | empty |
| 3 | 80 | 0.37 | 0.77 | 15 | empty |
| 4 | 109 | 0.35 | 0.74 | 17 | empty |
| 5 | 51 | 0.29 | 0.76 | 16 | empty |
Interfaces
1 interface between chains.
- A–B · 1117 Ų buried · 15 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P01012
- Elsewhere: RCSB PDB 1JTI · PDBe 1JTI · UniProt P01012
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