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Crystal structure of chaetomium thermophilum SKN7 with hse DNA

Analyse Crystal structure of chaetomium thermophilum SKN7 with hse DNA in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5D5W
Type: protein + DNA
Length: 106 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hse DNA; Putative transcription factor
UniProt: G0SB31

Structure

x-ray diffraction · 2 distinct chains · 40% helix, 15% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Hse DNA	dna	12	—	—
B	Putative transcription factor	protein	94	40% helix, 15% strand	G0SB31

Interfaces

1 interface between chains.

A–B · 441 Å² buried · 6 hydrogen bonds · protein-nucleic

Compared structures

5D5W · Crystal structure of Chaetomium thermophilum Skn7 with HSE DNA · the same entry in another collection · chain A against A, TM-score 1.00
G0SB31 · AlphaFold monomer V2.0 prediction for transcription factor SKN7 (G0SB31) · a predicted model of the same protein · chain B against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt G0SB31
Elsewhere: RCSB PDB 5D5W · PDBe 5D5W · UniProt G0SB31

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