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Structure of the soluble domain of ECCB1 from the mycobacterium smegmatis esx-1 secretion system.

Analyse Structure of the soluble domain of ECCB1 from the mycobacterium smegmatis esx-1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5CYU
Type: protein
Length: 378 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Conserved membrane protein
UniProt: A0QNJ0
Pockets: 1 · best druggability 0.54

Structure

x-ray diffraction · 1 distinct chain · 13% helix, 30% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Conserved membrane protein	protein	378	13% helix, 30% strand	A0QNJ0

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	63	0.54	0.87	19	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

5CYU · Structure of the soluble domain of EccB1 from the Mycobacterium smegmatis ESX-1 secretion… · the same entry in another collection · chain A against A, TM-score 1.00
A0QNJ0 · AlphaFold monomer V2.0 prediction for esx-1 secretion system ATPase ECCB1 (A0QNJ0) · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0QNJ0
Elsewhere: RCSB PDB 5CYU · PDBe 5CYU · UniProt A0QNJ0

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