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Fitting of L11 protein in the low resolution cryo-EM MAP of E.COLI 70S ribosome

Analyse Fitting of L11 protein in the low resolution cryo-EM MAP of E.COLI 70S ribosome in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1JQT
Type
protein
Length
133 residues
Chains
1
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
50S ribosomal protein L11
UniProt
P29395

Structure

electron microscopy · 1 distinct chain · 0% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A50S ribosomal protein L11protein1330% helix, 0% strandP29395

Compared structures

  • 1JQT · Fitting of L11 protein in the low resolution cryo-EM map of E.coli 70S ribosome · the same entry in another collection · chain A against A, TM-score 1.00
  • 1OLN · Model for thiostrepton antibiotic binding to L11 substrate from 50S ribosomal RNA · a predicted model of the same protein · chain A against A, TM-score 0.67
  • 1OLN · Model for thiostrepton antibiotic binding to L11 substrate from 50S ribosomal RNA · a predicted model of the same protein · chain A against A, TM-score 0.67
  • P29395 · AlphaFold monomer V2.0 prediction for 50S ribosomal protein L11 (P29395) · a predicted model of the same protein · chain A against A, TM-score 0.65

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