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Crystal structure of the cytoplasmic domain of the pseudomonas putida anti-sigma factor pupr (semet)
Analyse Crystal structure of the cytoplasmic domain of the pseudomonas putida… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5CAM
- Type
- protein
- Length
- 227 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Pupr protein
- UniProt
- Q52209
Structure
x-ray diffraction · 3 distinct chains · 79% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pupr protein | protein | 55 | 80% helix, 0% strand | Q52209 |
| B | Pupr protein | protein | 54 | 80% helix, 0% strand | Q52209 |
| C, D | Pupr protein | protein | 59 | 78% helix, 5% strand | Q52209 |
Interfaces
4 interfaces between chains.
- A–B · 890 Ų buried · 2 hydrogen bonds · protein-protein
- C–D · 744 Ų buried · 7 hydrogen bonds · protein-protein
- B–C · 375 Ų buried · 1 hydrogen bond · protein-protein
- B–D · 220 Ų buried · 0 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 12 modified (engineered).
Compared structures
- 5CAM · Crystal Structure of the Cytoplasmic Domain of the Pseudomonas putida Anti-sigma Factor… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q52209
- Elsewhere: RCSB PDB 5CAM · PDBe 5CAM · UniProt Q52209
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