Research workbench
PROTEIN A
Analyse PROTEIN A in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5C6N
- Type
- protein
- Length
- 446 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- BH2163 protein
- UniProt
- Q9KAX3
- Pockets
- 7 · best druggability 0.88
Structure
x-ray diffraction · 1 distinct chain · 68% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | BH2163 protein | protein | 446 | 68% helix, 0% strand | Q9KAX3 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1110 | 0.88 | 0.88 | 113 | empty |
| 2 | 67 | 0.66 | 0.93 | 24 | empty |
| 3 | 117 | 0.47 | 0.78 | 18 | empty |
| 4 | 91 | 0.46 | 0.80 | 21 | empty |
| 5 | 133 | 0.45 | 0.77 | 17 | empty |
Compared structures
- 5C6N · protein A · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9KAX3
- Elsewhere: RCSB PDB 5C6N · PDBe 5C6N · UniProt Q9KAX3
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