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Crystal structure of mcl-1 bound to bid-mm

Analyse Crystal structure of mcl-1 bound to bid-mm in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
5C3F
Type
protein
Length
173 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Induced myeloid leukemia cell differentiation protein mcl- 1; Bid-mm
UniProt
Q07820
Ligands
ACE

Structure

x-ray diffraction · 2 distinct chains · 82% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AInduced myeloid leukemia cell differentiation protein mcl- 1protein15180% helix, 0% strandQ07820
BBid-mmprotein2291% helix, 0% strand—

Ligands and binding sites

  • ACE · Acetyl group · ligand · chains B
  • GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–B · 910 Ų buried · 7 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 3 modified, 1 covalent (nonstandard, covalent ligand).

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