Research workbench
Structure of the N-terminal domain of LPG1496 from legionella pneumophila
Analyse Structure of the N-terminal domain of LPG1496 from legionella pneumophila in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5BTW
- Type
- protein
- Length
- 264 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized protein
- UniProt
- Q5ZVE4
- Pockets
- 2 · best druggability 0.68
Structure
x-ray diffraction · 1 distinct chain · 21% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Uncharacterized protein | protein | 132 | 21% helix, 35% strand | Q5ZVE4 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 591 | 0.68 | 0.77 | 51 | empty |
| 2 | 159 | 0.48 | 0.77 | 19 | empty |
Interfaces
1 interface between chains.
- A–B · 257 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 5BTW · Structure of the N-terminal domain of lpg1496 from Legionella pneumophila · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5ZVE4
- Elsewhere: RCSB PDB 5BTW · PDBe 5BTW · UniProt Q5ZVE4
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