Research workbench

Structure of shigella effector lrr domain

Analyse Structure of shigella effector lrr domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5B0T
Type: protein
Length: 220 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: E3 ubiquitin-protein ligase IPAH9.8
EC: 6.3.2.-
UniProt: Q8VSC3

Structure

x-ray diffraction · 1 distinct chain · 18% helix, 13% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	E3 ubiquitin-protein ligase IPAH9.8 (EC 6.3.2.-)	protein	220	18% helix, 13% strand	Q8VSC3

Compared structures

5B0T · Structure of Shigella effector LRR domain · the same entry in another collection · chain A against A, TM-score 1.00
Q8VSC3 · AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase IPAH9.8 (Q8VSC3) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8VSC3
Elsewhere: RCSB PDB 5B0T · PDBe 5B0T · UniProt Q8VSC3

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.