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Crystal structure of the MN(2+)-bound form of response regulator RCP1

Analyse Crystal structure of the MN(2+)-bound form of response regulator RCP1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1JLK
Type
protein
Length
280 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Response regulator RCP1
UniProt
Q55169
Ligands
MN, SO4

Structure

x-ray diffraction · 2 distinct chains · 42% helix, 18% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AResponse regulator RCP1protein14141% helix, 18% strandQ55169
BResponse regulator RCP1protein13942% helix, 18% strandQ55169

Ligands and binding sites

  • MN · Manganese (II) ion · metal · chains A
  • SO4 · Sulfate ion · ion · 3 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–B · 1256 Ų buried · 12 hydrogen bonds · protein-protein

Compared structures

  • 1JLK · Crystal structure of the Mn(2+)-bound form of response regulator Rcp1 · the same entry in another collection · chain A against A, TM-score 1.00
  • Q55169 · AlphaFold monomer V2.0 prediction for response regulator RCP1 (Q55169) · a predicted model of the same protein · chain B against A, TM-score 0.99

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