Research workbench
Crystal structure of (5-residue DELETED)MBP-TOM20 fusion protein tethered with aldh presequence via a disulfide bond
Analyse Crystal structure of (5-residue DELETED)MBP-TOM20 fusion protein tethered with… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5AZ9
- Type
- protein
- Length
- 425 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Maltose-binding periplasmic PROTEIN,MITOCHONDRIAL import receptor subunit TOM20 homolog
- UniProt
- P0AEX9, Q62760
- Pockets
- 3 · best druggability 0.53
Structure
x-ray diffraction · 1 distinct chain · 49% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Maltose-binding periplasmic PROTEIN,MITOCHONDRIAL import receptor subunit TOM20 homolog | protein | 425 | 49% helix, 18% strand | P0AEX9, Q62760 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 231 | 0.53 | 0.76 | 34 | empty |
| 2 | 91 | 0.51 | 0.82 | 18 | empty |
| 3 | 98 | 0.37 | 0.75 | 15 | empty |
Compared structures
- 5AZ9 · Crystal structure of (5-residue deleted)MBP-Tom20 fusion protein tethered with ALDH… · the same entry in another collection · chain A against A, TM-score 1.00
- Q62760 · AlphaFold monomer V2.0 prediction for mitochondrial import receptor subunit TOM20 homolog… · a predicted model of the same protein · chain A against A, TM-score 0.14
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0AEX9
- Every structure of UniProt Q62760
- Elsewhere: RCSB PDB 5AZ9 · PDBe 5AZ9 · UniProt P0AEX9 · UniProt Q62760
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