Research workbench
Intracellular growth locus protein E
Analyse Intracellular growth locus protein E in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5AMT
- Type
- protein
- Length
- 208 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Igle
- UniProt
- A0Q7H2
- Ligands
- BR
- Pockets
- 2 · best druggability 0.58
Structure
x-ray diffraction · 2 distinct chains · 11% helix, 41% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Igle | protein | 105 | 10% helix, 41% strand | A0Q7H2 |
| B | Igle | protein | 103 | 11% helix, 42% strand | A0Q7H2 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 292 | 0.58 | 0.77 | 34 | BR |
| 2 | 51 | 0.35 | 0.79 | 15 | BR |
Interfaces
1 interface between chains.
- A–B · 384 Ų buried · 7 hydrogen bonds · protein-protein
Compared structures
- 5AMT · Intracellular growth locus protein E · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0Q7H2
- Elsewhere: RCSB PDB 5AMT · PDBe 5AMT · UniProt A0Q7H2
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