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A complex of the synthetic siderophore analogue FE(III)-8-licam with the ceue periplasmic protein from campylobacter jejuni

Analyse A complex of the synthetic siderophore analogue FE(III)-8-licam with the ceue… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5AD1
Type: protein
Length: 290 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Enterochelin uptake periplasmic binding protein
UniProt: Q0P8Q4
Ligands: 8LC, FE
Pockets: 1 · best druggability 0.56

Structure

x-ray diffraction · 1 distinct chain · 42% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Enterochelin uptake periplasmic binding protein	protein	290	42% helix, 21% strand	Q0P8Q4

Ligands and binding sites

8LC · N,N'-octane-1,8-diylbis(2,3-dihydroxybenzamide) · ligand · chains A
FE · Fe (III) ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	186	0.56	0.80	38	FE

Compared structures

5AD1 · A complex of the synthetic siderophore analogue Fe(III)-8-LICAM with the CeuE periplasmic… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q0P8Q4
Elsewhere: RCSB PDB 5AD1 · PDBe 5AD1 · UniProt Q0P8Q4

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