Research workbench
Crystal structure of BBA68 or bbcrasp-1 from borrelia burgdorferi strain B31
Analyse Crystal structure of BBA68 or bbcrasp-1 from borrelia burgdorferi strain B31 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5A2U
- Type
- protein
- Length
- 355 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Complement regulator acquiring protein 1
- UniProt
- Q66ZA0
- Pockets
- 3 · best druggability 0.58
Structure
x-ray diffraction · 2 distinct chains · 76% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Complement regulator acquiring protein 1 | protein | 181 | 75% helix, 1% strand | Q66ZA0 |
| B | Complement regulator acquiring protein 1 | protein | 174 | 77% helix, 0% strand | Q66ZA0 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 448 | 0.58 | 0.74 | 37 | empty |
| 2 | 69 | 0.42 | 0.80 | 17 | empty |
| 3 | 79 | 0.36 | 0.75 | 13 | empty |
Interfaces
1 interface between chains.
- A–B · 79 Ų buried · 3 hydrogen bonds · protein-protein
Compared structures
- 5A2U · Crystal structure of BBA68 or BbCRASP-1 from Borrelia burgdorferi strain B31 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q66ZA0
- Elsewhere: RCSB PDB 5A2U · PDBe 5A2U · UniProt Q66ZA0
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