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Crystal structure of the insecticidal bacterial del endotoxin CRY3BB1 bacillus thuringiensis

Analyse Crystal structure of the insecticidal bacterial del endotoxin CRY3BB1 bacillus… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1JI6
Type: protein
Length: 589 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Pesticidial crystal protein CRY3BB
UniProt: Q06117
Pockets: 5 · best druggability 0.73

Structure

x-ray diffraction · 1 distinct chain · 35% helix, 28% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Pesticidial crystal protein CRY3BB	protein	589	35% helix, 28% strand	Q06117

Pockets

5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	349	0.73	0.85	40	empty
2	200	0.50	0.76	34	empty
3	109	0.43	0.77	15	empty
4	78	0.33	0.75	23	empty
5	92	0.32	0.73	17	empty

Compared structures

1JI6 · CRYSTAL STRUCTURE OF THE INSECTICIDAL BACTERIAL DEL ENDOTOXIN CRY3Bb1 BACILLUS… · the same entry in another collection · chain A against A, TM-score 1.00
Q06117 · AlphaFold monomer V2.0 prediction for pesticidal crystal protein CRY3BB (Q06117) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q06117
Elsewhere: RCSB PDB 1JI6 · PDBe 1JI6 · UniProt Q06117

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