Research workbench
SIDC 1-871
Analyse SIDC 1-871 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4ZUZ
- Type
- protein
- Length
- 1,715 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Sidc
- UniProt
- Q6RCR4
- Pockets
- 20 · best druggability 0.77
Structure
x-ray diffraction · 2 distinct chains · 54% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sidc | protein | 857 | 54% helix, 7% strand | Q6RCR4 |
| B | Sidc | protein | 858 | 54% helix, 7% strand | Q6RCR4 |
Pockets
20 pockets found on a 1 Å grid, 16 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 653 | 0.77 | 0.82 | 79 | empty |
| 2 | 626 | 0.75 | 0.81 | 63 | empty |
| 3 | 70 | 0.73 | 0.98 | 24 | empty |
| 4 | 534 | 0.73 | 0.81 | 61 | empty |
| 5 | 76 | 0.73 | 0.97 | 28 | empty |
Interfaces
1 interface between chains.
- A–B · 1154 Ų buried · 10 hydrogen bonds · protein-protein
Compared structures
- 4ZUZ · SidC 1-871 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6RCR4
- Elsewhere: RCSB PDB 4ZUZ · PDBe 4ZUZ · UniProt Q6RCR4
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