Research workbench
Coxsackievirus B3 polymerase - A345V mutant
Analyse Coxsackievirus B3 polymerase - A345V mutant in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4ZPD
- Type
- protein
- Length
- 462 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RNA-directed RNA polymerase
- UniProt
- Q5UEA2
- Pockets
- 4 · best druggability 0.63
Structure
x-ray diffraction · 1 distinct chain · 43% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA-directed RNA polymerase | protein | 462 | 43% helix, 16% strand | Q5UEA2 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 595 | 0.63 | 0.75 | 49 | empty |
| 2 | 435 | 0.61 | 0.76 | 53 | empty |
| 3 | 104 | 0.48 | 0.81 | 25 | empty |
| 4 | 152 | 0.41 | 0.74 | 20 | empty |
Compared structures
- 4ZPD · Coxsackievirus B3 Polymerase - A345V mutant · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5UEA2
- Elsewhere: RCSB PDB 4ZPD · PDBe 4ZPD · UniProt Q5UEA2
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.