Research workbench
Cellobionic acid phosphorylase - ligand free structure
Analyse Cellobionic acid phosphorylase - ligand free structure in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4ZLE
- Type
- protein
- Length
- 784 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative B-glycan phosphorylase
- EC
- 2.4.1.321
- UniProt
- Q21MB1
- Ligands
- SO4, CL
- Pockets
- 8 · best druggability 0.79
Structure
x-ray diffraction · 1 distinct chain · 32% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative B-glycan phosphorylase (EC 2.4.1.321) | protein | 784 | 32% helix, 26% strand | Q21MB1 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 6 copies · chains A
- CL · Chloride ion · ion · chains A
- GOL · Glycerol · additive · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
8 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1018 | 0.79 | 0.81 | 75 | SO4, GOL |
| 2 | 166 | 0.48 | 0.76 | 22 | empty |
| 3 | 103 | 0.44 | 0.79 | 25 | empty |
| 4 | 129 | 0.39 | 0.74 | 19 | empty |
| 5 | 53 | 0.35 | 0.79 | 13 | GOL |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q21MB1
- Elsewhere: RCSB PDB 4ZLE · PDBe 4ZLE · UniProt Q21MB1
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