Research workbench
NMR solution structure of an ef-hand calcium binding protein from entamoeba histolytica
Analyse NMR solution structure of an ef-hand calcium binding protein from entamoeba… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1JFJ
- Type
- protein
- Length
- 134 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Calcium-binding protein
- UniProt
- P38505
- Pockets
- 1 · best druggability 0.42
Structure
solution nmr · 1 distinct chain · 57% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Calcium-binding protein | protein | 134 | 57% helix, 9% strand | P38505 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 140 | 0.42 | 0.74 | 16 | empty |
Compared structures
- 1JFJ · NMR solution structure of an ef-hand calcium binding protein from entamoeba histolytica · the same entry in another collection · chain A against A, TM-score 1.00
- P38505 · AlphaFold monomer V2.0 prediction for calcium-binding protein (P38505) · a predicted model of the same protein · chain A against A, TM-score 0.42
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P38505
- Elsewhere: RCSB PDB 1JFJ · PDBe 1JFJ · UniProt P38505
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