Research workbench
Crystal structure of cellobiose 2-epimerase from caldicellulosiruptor saccharolyticus dsm 8903
Analyse Crystal structure of cellobiose 2-epimerase from caldicellulosiruptor… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4Z4L
- Type
- protein
- Length
- 392 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cellobiose 2-epimerase
- EC
- 5.1.3.11
- UniProt
- A4XGA6
- Pockets
- 2 · best druggability 0.64
Structure
x-ray diffraction · 1 distinct chain · 55% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cellobiose 2-epimerase (EC 5.1.3.11) | protein | 392 | 55% helix, 14% strand | A4XGA6 |
Ligands and binding sites
- EDO · 1,2-ethanediol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 402 | 0.64 | 0.78 | 29 | empty |
| 2 | 127 | 0.51 | 0.81 | 25 | empty |
Compared structures
- 4Z4L · Crystal Structure of cellobiose 2-epimerase from Caldicellulosiruptor saccharolyticus DSM… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4XGA6
- Elsewhere: RCSB PDB 4Z4L · PDBe 4Z4L · UniProt A4XGA6
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.