Research workbench
Crystal structure of photoactivated adenylyl cyclase of a cyanobacteriaoscillatoria acuminata in hexagonal form
Analyse Crystal structure of photoactivated adenylyl cyclase of a… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4YUS
- Type
- protein
- Length
- 350 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Family 3 adenylate cyclase
- EC
- 4.6.1.1
- UniProt
- K9TLZ5
- Ligands
- FMN
- Pockets
- 4 · best druggability 0.61
Structure
x-ray diffraction · 1 distinct chain · 44% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Family 3 adenylate cyclase (EC 4.6.1.1) | protein | 350 | 44% helix, 30% strand | K9TLZ5 |
Ligands and binding sites
- FMN · Flavin mononucleotide · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 139 | 0.61 | 0.85 | 20 | FMN |
| 2 | 106 | 0.48 | 0.80 | 23 | empty |
| 3 | 90 | 0.35 | 0.74 | 20 | empty |
| 4 | 86 | 0.34 | 0.75 | 15 | empty |
Compared structures
- 4YUS · Crystal structure of photoactivated adenylyl cyclase of a cyanobacteriaOscillatoria… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt K9TLZ5
- Elsewhere: RCSB PDB 4YUS · PDBe 4YUS · UniProt K9TLZ5
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