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Crystal structure of apo HIV-1 protease MDR769 L33F

Analyse Crystal structure of apo HIV-1 protease MDR769 L33F in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4YOB
Type: protein
Length: 99 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: HIV-1 protease
UniProt: Q5RTL1
Pockets: 1 · best druggability 0.47

Structure

x-ray diffraction · 1 distinct chain · 4% helix, 46% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	HIV-1 protease	protein	99	4% helix, 46% strand	Q5RTL1

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	143	0.47	0.77	20	empty

Compared structures

4YOB · Crystal Structure of Apo HIV-1 Protease MDR769 L33F · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5RTL1
Elsewhere: RCSB PDB 4YOB · PDBe 4YOB · UniProt Q5RTL1

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