Research workbench
Tubulin glutamylase
Analyse Tubulin glutamylase in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4YLR
- Type
- protein
- Length
- 331 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Tubulin polyglutamylase TTLL7
- EC
- 6.-.-.-
- UniProt
- Q6ZT98
- Ligands
- ADP
- Pockets
- 3 · best druggability 0.43
Structure
x-ray diffraction · 1 distinct chain · 37% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Tubulin polyglutamylase TTLL7 (EC 6.-.-.-) | protein | 331 | 37% helix, 25% strand | Q6ZT98 |
Ligands and binding sites
- ADP · Adenosine-5'-diphosphate · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 101 | 0.43 | 0.77 | 16 | ADP |
| 2 | 68 | 0.34 | 0.76 | 14 | empty |
| 3 | 58 | 0.31 | 0.76 | 19 | empty |
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6ZT98
- Elsewhere: RCSB PDB 4YLR · PDBe 4YLR · UniProt Q6ZT98
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