Research workbench
Crystal structure of the indole prenyltransferase mpnd from marinactinospora thermotolerans
Analyse Crystal structure of the indole prenyltransferase mpnd from marinactinospora… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4YL7
- Type
- protein
- Length
- 370 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Aromatic prenyltransferase
- UniProt
- I7EIW6
- Pockets
- 5 · best druggability 0.82
Structure
x-ray diffraction · 1 distinct chain · 35% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Aromatic prenyltransferase | protein | 370 | 35% helix, 20% strand | I7EIW6 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 184 | 0.82 | 0.96 | 21 | empty |
| 2 | 442 | 0.71 | 0.82 | 59 | empty |
| 3 | 152 | 0.47 | 0.77 | 23 | empty |
| 4 | 54 | 0.43 | 0.83 | 19 | empty |
| 5 | 50 | 0.39 | 0.81 | 20 | empty |
Compared structures
- 4YL7 · Crystal structure of the indole prenyltransferase MpnD from Marinactinospora… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt I7EIW6
- Elsewhere: RCSB PDB 4YL7 · PDBe 4YL7 · UniProt I7EIW6
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.