Research workbench
Crystal structure of Y75A hasa dimer from yersinia pseudotuberculosis
Analyse Crystal structure of Y75A hasa dimer from yersinia pseudotuberculosis in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4Y4S
- Type
- protein
- Length
- 155 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Extracellular heme acquisition hemophore hasa
- UniProt
- Q66G68
- Ligands
- HEM, SO4
- Pockets
- 2 · best druggability 0.55
Structure
x-ray diffraction · 1 distinct chain · 26% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Extracellular heme acquisition hemophore hasa | protein | 155 | 26% helix, 25% strand | Q66G68 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 300 | 0.55 | 0.75 | 35 | empty |
| 2 | 59 | 0.38 | 0.79 | 13 | empty |
Compared structures
- 4Y4S · Crystal Structure of Y75A HasA dimer from Yersinia pseudotuberculosis · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q66G68
- Elsewhere: RCSB PDB 4Y4S · PDBe 4Y4S · UniProt Q66G68
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