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Crystal structure of native gaf domain of potassium sensor histidine kinase kdpd from escherichia COLI

Analyse Crystal structure of native gaf domain of potassium sensor histidine kinase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4Y2F
Type: protein
Length: 143 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Sensor protein kdpd
EC: 2.7.13.3
UniProt: P21865
Pockets: 1 · best druggability 0.33

Structure

x-ray diffraction · 1 distinct chain · 48% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Sensor protein kdpd (EC 2.7.13.3)	protein	143	48% helix, 20% strand	P21865

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	73	0.33	0.75	16	empty

Compared structures

4Y2F · CRYSTAL STRUCTURE OF NATIVE GAF DOMAIN of POTASSIUM SENSOR HISTIDINE KINASE KDPD FROM… · the same entry in another collection · chain A against A, TM-score 1.00
P21865 · AlphaFold monomer V2.0 prediction for sensor protein kdpd (P21865) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P21865
Elsewhere: RCSB PDB 4Y2F · PDBe 4Y2F · UniProt P21865

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