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Structure of agra lyttr domain

Analyse Structure of agra lyttr domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4XYO
Type: protein
Length: 99 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Accessory gene regulator a
UniProt: Q5HEG2

Structure

x-ray diffraction · 1 distinct chain · 15% helix, 47% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Accessory gene regulator a	protein	99	15% helix, 47% strand	Q5HEG2

Ligands and binding sites

EDO · 1,2-ethanediol · additive · 5 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

4XYO · Structure of AgrA LytTR domain · the same entry in another collection · chain A against A, TM-score 1.00
Q5HEG2 · AlphaFold monomer V2.0 prediction for accessory gene regulator a (Q5HEG2) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5HEG2
Elsewhere: RCSB PDB 4XYO · PDBe 4XYO · UniProt Q5HEG2

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