Research workbench
Granulicella M. formate dehydrogenase (fdh)
Analyse Granulicella M. formate dehydrogenase (fdh) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4XYG
- Type
- protein
- Length
- 376 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Formate dehydrogenase
- EC
- 1.2.1.2
- UniProt
- G8NVB5
- Pockets
- 4 · best druggability 0.73
Structure
x-ray diffraction · 1 distinct chain · 34% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Formate dehydrogenase (EC 1.2.1.2) | protein | 376 | 34% helix, 17% strand | G8NVB5 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 627 | 0.73 | 0.80 | 61 | empty |
| 2 | 104 | 0.43 | 0.78 | 17 | empty |
| 3 | 140 | 0.42 | 0.74 | 25 | empty |
| 4 | 54 | 0.27 | 0.74 | 18 | empty |
Compared structures
- 4XYG · Granulicella M. formate dehydrogenase (fdh) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G8NVB5
- Elsewhere: RCSB PDB 4XYG · PDBe 4XYG · UniProt G8NVB5
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