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Structure of esx-1 secreted protein espb

Analyse Structure of esx-1 secreted protein espb in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4XY3
Type: protein
Length: 243 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Esx-1 secretion-associated protein espb
UniProt: P9WJD9
Pockets: 2 · best druggability 0.53

Structure

x-ray diffraction · 1 distinct chain · 66% helix, 1% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Esx-1 secretion-associated protein espb	protein	243	66% helix, 1% strand	P9WJD9

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	54	0.53	0.88	21	empty
2	50	0.34	0.78	18	empty

Compared structures

4XY3 · Structure of ESX-1 secreted protein EspB · the same entry in another collection · chain A against A, TM-score 1.00
P9WJD9 · AlphaFold monomer V2.0 prediction for esx-1 secretion-associated protein espb (P9WJD9) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P9WJD9
Elsewhere: RCSB PDB 4XY3 · PDBe 4XY3 · UniProt P9WJD9

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